Ensembl 2018

2017 Nucleic Acids Research 2,734 citations

Abstract

The Ensembl project has been aggregating, processing, integrating and redistributing genomic datasets since the initial releases of the draft human genome, with the aim of accelerating genomics research through rapid open distribution of public data. Large amounts of raw data are thus transformed into knowledge, which is made available via a multitude of channels, in particular our browser (http://www.ensembl.org). Over time, we have expanded in multiple directions. First, our resources describe multiple fields of genomics, in particular gene annotation, comparative genomics, genetics and epigenomics. Second, we cover a growing number of genome assemblies; Ensembl Release 90 contains exactly 100. Third, our databases feed simultaneously into an array of services designed around different use cases, ranging from quick browsing to genome-wide bioinformatic analysis. We present here the latest developments of the Ensembl project, with a focus on managing an increasing number of assemblies, supporting efforts in genome interpretation and improving our browser.

Keywords

EnsemblGenomicsGenomeBiologyGenome browserAnnotationComputational biologyEpigenomicsWorld Wide WebData scienceComputer scienceBioinformaticsGeneticsGene

MeSH Terms

AnimalsDatabasesGeneticDatasets as TopicEpigenomicsGenomeGenomeHumanGenome-Wide Association StudyGenomicsHigh-Throughput Nucleotide SequencingHumansInformation DisseminationMolecular Sequence AnnotationVertebratesWeb Browser

Affiliated Institutions

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Publication Info

Year
2017
Type
article
Volume
46
Issue
D1
Pages
D754-D761
Citations
2734
Access
Closed

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2734
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93
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2550
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Cite This

Daniel R. Zerbino, Premanand Achuthan, Wasiu Akanni et al. (2017). Ensembl 2018. Nucleic Acids Research , 46 (D1) , D754-D761. https://doi.org/10.1093/nar/gkx1098

Identifiers

DOI
10.1093/nar/gkx1098
PMID
29155950
PMCID
PMC5753206

Data Quality

Data completeness: 86%