Publications

A familial cluster of pneumonia associated with the 2019 novel coronavirus indicating person-to-person transmission: a study of a family cluster

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

We have developed a new set of algorithms, collectively called “Velvet,” to manipulate de Bruijn graphs for genomic sequence assembly. A de Bruijn graph is a compact representat...

Sequence and organization of the human mitochondrial genome

Gene expression profiling predicts clinical outcome of breast cancer

Signal Recovery From Random Measurements Via Orthogonal Matching Pursuit

This paper demonstrates theoretically and empirically that a greedy algorithm called Orthogonal Matching Pursuit (OMP) can reliably recover a signal with $m$ nonzero entries in ...

The mutational constraint spectrum quantified from variation in 141,456 humans

Handbook of Mathematical Functions

Focal Loss for Dense Object Detection

The highest accuracy object detectors to date are based on a two-stage approach popularized by R-CNN, where a classifier is applied to a sparse set of candidate object locations...

Structure, Function, and Antigenicity of the SARS-CoV-2 Spike Glycoprotein

Disability-adjusted life years (DALYs) for 291 diseases and injuries in 21 regions, 1990–2010: a systematic analysis for the Global Burden of Disease Study 2010

Novel methods improve prediction of species’ distributions from occurrence data

Prediction of species’ distributions is central to diverse applications in ecology, evolution and conservation science. There is increasing electronic access to vast sets of occ...

Global burden of 87 risk factors in 204 countries and territories, 1990–2019: a systematic analysis for the Global Burden of Disease Study 2019