University of California, San Diego

Self-Consistent Equations Including Exchange and Correlation Effects

From a theory of Hohenberg and Kohn, approximation methods for treating an inhomogeneous system of interacting electrons are developed. These methods are exact for systems of sl...

Co-Integration and Error Correction: Representation, Estimation, and Testing

The relationship between co-integration and error correction models, first suggested in Granger (1981), is here extended and used to develop estimation procedures, tests, and em...

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

The lion's share of bacteria in various environments cannot be cloned in the laboratory and thus cannot be sequenced using existing technologies. A major goal of single-cell gen...

A simple method for displaying the hydropathic character of a protein

Investigating Causal Relations by Econometric Models and Cross-spectral Methods

There occurs on some occasions a difficulty in deciding the direction of causality between two related variables and also whether or not feedback is occurring. Testable definiti...

Generalized autoregressive conditional heteroskedasticity

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

Multilayer feedforward networks are universal approximators

Metascape provides a biologist-oriented resource for the analysis of systems-level datasets

A critical component in the interpretation of systems-level studies is the inference of enriched biological pathways and protein complexes contained within OMICs datasets. Succe...

Simple Combinations of Lineage-Determining Transcription Factors Prime cis-Regulatory Elements Required for Macrophage and B Cell Identities