Phylogenomics and the reconstruction of the tree of life

Keywords

PhylogenomicsTree of life (biology)Phylogenetic treeBiologyPhylogeneticsEvolutionary biologyGenomeTree (set theory)Computational biologyGeneGeneticsClade

Affiliated Institutions

Canadian Institute for Advanced Research CA

Related Publications

TCS: a computer program to estimate gene genealogies

Mark Clement , David Posada , Keith A. Crandall

Phylogenies are extremely useful tools, not only for establishing genealogical relationships among a group of organisms or their parts (e.g. genes), but also for a variety of re...

2000 Molecular Ecology 9775 citations

High throughput ANI analysis of 90K prokaryotic genomes reveals clear species boundaries

Chirag Jain , Luis M. Rodriguez‐R , Adam M. Phillippy +2 more

2018 Nature Communications 4880 citations

OrthoFinder: phylogenetic orthology inference for comparative genomics

David Emms , Steven Kelly

Abstract Here, we present a major advance of the OrthoFinder method. This extends OrthoFinder’s high accuracy orthogroup inference to provide phylogenetic inference of orthologs...

2019 Genome biology 6942 citations

Inferring ancient divergences requires genes with strong phylogenetic signals

Leonidas Salichos , Antonis Rokas

2013 Nature 665 citations

Testing Substitution Models Within a Phylogenetic Tree

Günter Weiß

Phylogenetic tree reconstruction frequently assumes the homogeneity of the substitution process over the whole tree. To test this assumption statistically, we propose a test bas...

2003 Molecular Biology and Evolution 25 citations

Publication Info

Year: 2005
Type: review
Volume: 6
Issue: 5
Pages: 361-375
Citations: 1222
Access: Closed

External Links

View on DOI.org

Social Impact

Altmetric

Phylogenomics and the reconstruction of the tree of life

PlumX Metrics

Social media, news, blog, policy document mentions

Citation Metrics

1222

OpenAlex

Cite This

APA Style

                            
                                    Frédéric Delsuc, 
                                
                                    Henner Brinkmann, 
                                
                                    Hervé Philippe
                                
                            (2005). 
                            Phylogenomics and the reconstruction of the tree of life. 
                            Nature Reviews Genetics
                            , 6
                            (5)
                            , 361-375.
                            https://doi.org/10.1038/nrg1603

Identifiers

DOI: 10.1038/nrg1603