Shifting the limits in wheat research and breeding using a fully annotated reference genome

R. Appels , Kellye Eversole , Nils Stein , R. Appels , Kellye Eversole , Nils Stein , Catherine Feuillet , Beat Keller , Jane Rogers , Curtis Pozniak , Frédéric Choulet , Assaf Distelfeld , Jesse Poland , Gil Ronen , Andrew Sharpe , Omer Barad , Kobi Baruch , Gabriel Keeble‐Gagnère , Martin Mascher , Gil Ben-Zvi , Ambre-Aurore Josselin , Axel Himmelbach , François Balfourier , Juan J. Gutiérrez-González , Matthew Hayden , ChuShin Koh , Gary J. Muehlbauer , Raj Pasam , Etienne Paux , Philippe Rigault , Josquin Tibbits , Vijay Tiwari , M. Spannagl , Daniel Lang , Heidrun Gundlach , Georg Haberer , Klaus Mayer , Danara Ormanbekova , Verena M. Prade , Hana Šimková , Thomas Wicker , David Swarbreck , Hélène Rimbert , Marius Felder , Nicolas Guilhot , Gemy Kaithakottil , Jens Keilwagen , Philippe Leroy , Thomas Lux , Sven Twardziok , Luca Venturini , Angéla Juhász , Michaël Abrouk , Iris Fischer , Cristóbal Uauy , Philippa Borrill , Ricardo H. Ramírez-González , Dominique Arnaud , Smahane Chalabi , Boulos Chalhoub , Aron T. Cory , Raju Datla , Mark W. Davey , John Jacobs , Stephen J. Robinson , Burkhard Steuernagel , Fred van Ex , Brande B. H. Wulff , Moussa Benhamed , Abdelhafid Bendahmane , Lorenzo Concia , David Latrasse , Jan Bartoš , Arnaud Bellec , Hélène Bergès , Jaroslav Doležel , Zeev Frenkel , Bikram Gill , Abraham B. Korol , Thomas Letellier , Odd-Arne Olsen , Kuldeep Singh , Miroslav Valárik , Edwin van der Vossen , Sonia S. Vautrin , Song Weining , Tzion Fahima , Vladimir Glikson , Dina Raats , Jarmila Číhalíková , Helena Toegelová , Jan Vrána , Pierre Sourdille , Benoît Darrier , Delfina Barabaschi , Luigi Cattivelli , Pilar Hernández , Sergio Gálvez , Hikmet Budak , Jonathan D. G. Jones , Kamil Witek , Guotai Yu , Ian Small
2018 Science 3,225 citations

Abstract

Insights from the annotated wheat genome Wheat is one of the major sources of food for much of the world. However, because bread wheat's genome is a large hybrid mix of three separate subgenomes, it has been difficult to produce a high-quality reference sequence. Using recent advances in sequencing, the International Wheat Genome Sequencing Consortium presents an annotated reference genome with a detailed analysis of gene content among subgenomes and the structural organization for all the chromosomes. Examples of quantitative trait mapping and CRISPR-based genome modification show the potential for using this genome in agricultural research and breeding. Ramírez-González et al. exploited the fruits of this endeavor to identify tissue-specific biased gene expression and coexpression networks during development and exposure to stress. These resources will accelerate our understanding of the genetic basis of bread wheat. Science , this issue p. eaar7191 ; see also p. eaar6089

Keywords

GenomeBiologyReference genomeComputational biologyGeneGeneticsBiotechnology

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Year
2018
Type
article
Volume
361
Issue
6403
Citations
3225
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Closed

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R. Appels, Kellye Eversole, Nils Stein et al. (2018). Shifting the limits in wheat research and breeding using a fully annotated reference genome. Science , 361 (6403) . https://doi.org/10.1126/science.aar7191

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DOI
10.1126/science.aar7191