B Bernstein

The NIH Roadmap Epigenomics Mapping Consortium

In vitro reprogramming of fibroblasts into a pluripotent ES-cell-like state

Comprehensive Mapping of Long-Range Interactions Reveals Folding Principles of the Human Genome

Chromosomal Mapping The conformation of the genome in the nucleus and contacts between both proximal and distal loci influence gene expression. In order to map genomic contacts,...

Genome-wide maps of chromatin state in pluripotent and lineage-committed cells

Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals

Integrative analysis of 111 reference human epigenomes

An integrated encyclopedia of DNA elements in the human genome

The human genome encodes the blueprint of life, but the function of the vast majority of its nearly three billion bases is unknown. The Encyclopedia of DNA Elements (ENCODE) pro...

ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia

Chromatin immunoprecipitation (ChIP) followed by high-throughput DNA sequencing (ChIP-seq) has become a valuable and widely used approach for mapping the genomic location of tra...

Model-based Analysis of ChIP-Seq (MACS)